Support Documentation

Index

Initializing search

GitHub

Contact Support

Support Documentation

GitHub

Announcements
Announcements
- Autodeletion of Scratch Filesystem
- Slurm Job email
- Known Issues HPC3
- Identity Changes for Crown Research Institutes
- Release Notes
  Release Notes
Getting Started
Getting Started
Software
Software
- Installing Applications Yourself
- Software Installation Request
- Software Version Management
- Available Applications
  Available Applications
  - ABAQUS
  - AlphaFold
  - ANSYS
  - Apptainer - Containers on HPC
  - BLAST
  - BRAKER
  - CESM
  - Clair3
  - COMSOL
  - CP2K
  - Cylc
  - Delft3D
  - Dorado
  - FDS
  - FlexiBLAS
  - FreeSurfer
  - fastStructure
  - GATK
  - Gaussian
  - GROMACS
  - GUFI
  - ipyrad
  - Java
  - Julia
  - Keras
  - LAMMPS
  - Lambda Stack
  - MAKER
  - MATLAB
  - Miniforge3
  - Molpro
  - Nextflow
  - NWChem
  - OpenFOAM
  - OpenSees
  - ORCA
  - ont-guppy-gpu
  - ParaView
  - Python
  - R
  - RAxML
  - Relion
  - Supernova
  - Synda
  - Snakemake
  - snpEff
  - TensorFlow on CPUs
  - TensorFlow on GPUs
  - Trinity
  - uv
  - VASP
  - VirSorter
  - VTune
  - WRF
- Containers
  Containers
- Parallel Computing
  Parallel Computing
- Profiling and Debugging
  Profiling and Debugging
Batch Computing
Batch Computing
Interactive Computing
Interactive Computing
- Interactive computing with OnDemand
  Interactive computing with OnDemand
  - How-to guide
  - Apps
    Apps
    
    VS Code
    
    Virtual desktop
    
    MATLAB via OnDemand
    
    RStudio via OnDemand
    
    JupyterLab
    
    JupyterLab
    
    Jupyter kernels - Tool-assisted management
    
    Jupyter kernels - Manual management
  - Troubleshooting
  - Release Notes
    
    Release Notes
- Slurm interactive sessions
- JupyterLab interactive sessions
- Marimo interactive sessions
- Pluto.ji interactive sessions
Storage
Storage
- Filesystems and Quotas
- File permissions and groups
- Data Recovery
- Offsite Storage Options
- Automatic cleaning of nobackup
- Databases
- Long Term Storage
  Long Term Storage
  - Freezer long term storage
  - Configuring s3cmd
  - Freezer Guide
  - Other Useful Commands
  - Troubleshooting
  - Release Notes freezer.nesi.org.nz
    Release Notes freezer.nesi.org.nz
    
    2025/06/23
    
    2025/07/17
    
    2025/08/05
    
    2025/08/26
    
    2025/09/22
    
    2025/10/15
    
    2025/10/29
    
    2025/12/01
    
    2026/01/13
    
    2026/02/18
Data Transfer
Data Transfer
Policy
Policy
Service Subscriptions
Service Subscriptions
- Contracts & Billing
  Contracts & Billing
  - Billing process
  - Types of contracts
- Service Governance
  Service Governance
- Pricing
- What is a Subscription?
- Research Developer Cloud
  Research Developer Cloud
  - User Guides
Tutorials
Tutorials
- Introduction To HPC
  Introduction To HPC

Index

Now fetching from https://github.com/nesi/nesi-wordlist

Quiz Progress

Answered: 0 / 0 (0%)
Correct: 0 / 0 (0%) Reset

Answered: 0 / 0 Correct: 0 / 0 Reset

October 31, 2023