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Getting Started
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Accounts, Projects and Allocations
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What is an allocation?
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Next Steps
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my.nesi.org.nz
my.nesi.org.nz
Logging in to my.nesi.org.nz
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Requesting to renew an allocation via my nesi org nz
The NeSI Project Request Form
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Release Notes my.nesi.org.nz
Release Notes my.nesi.org.nz
my.nesi.org.nz release notes v2.0.1
my.nesi.org.nz release notes v2.0.3
my.nesi.org.nz release notes v2.1.0
my.nesi.org.nz release notes v2.2.0
my.nesi.org.nz release notes v2.3.0
my.nesi.org.nz release notes v2.4.0
my.nesi.org.nz release notes v2.5.0
my.nesi.org.nz release notes v2.6.0
my.nesi.org.nz release notes v2.7.0
my.nesi.org.nz release notes v2.8.0
my.nesi.org.nz release notes v2.9.0
my.nesi.org.nz release notes v2.10.0
my.nesi.org.nz release notes v2.11.0
my.nesi.org.nz release notes v2.12.0
my.nesi.org.nz release notes v2.13.0
my.nesi.org.nz release notes v2.14.0
my.nesi.org.nz release notes v2.15.0
my.nesi.org.nz release notes v2.16.0
my.nesi.org.nz release notes v2.17.0
my.nesi.org.nz release notes v2.18.0
my.nesi.org.nz release notes v2.19.0
My nesi org nz release notes v2 20 0
my.nesi.org.nz release notes v2.21.0
my.nesi.org.nz release notes v2.22.0
my.nesi.org.nz release notes v2.23.0
my.nesi.org.nz release notes v2.24.0
my.nesi.org.nz release notes v2.25.0
my.nesi.org.nz release notes v2.26.0
my.nesi.org.nz release notes v2.27.0
my.nesi.org.nz release notes v2.28.0
my.nesi.org.nz release notes v2.29.0
my.nesi.org.nz release notes v2.30.0
my.nesi.org.nz release notes v2.31.0
my.nesi.org.nz release notes v2.33.0
my.nesi.org.nz release notes v2.34.0
my.nesi.org.nz release notes v2.35.0
my.nesi.org.nz release notes v2.36.0
my.nesi.org.nz release notes v2.37.0
my.nesi.org.nz release notes v2.38.0
my.nesi.org.nz release notes v2.39.0
my.nesi.org.nz release notes v2.40.0
my.nesi.org.nz release notes v2.41.0
my.nesi.org.nz release notes v2.42.0
my.nesi.org.nz release notes v2.43.0
my.nesi.org.nz release notes v2.44.0
General
General
Announcements
Announcements
Autodeletion returning of scratch filesystem
December holiday support restrictions
Identity Changes for Crown Research Institutes
FAQs
FAQs
Common questions about the platform refresh
Mahuika HPC3 Differences
Can I change my time zone to New Zealand time
Can I use SSHFS to mount the cluster filesystem on my local machine
Converting from Windows style to UNIX style line endings
How busy is the cluster?
How can I give read only team members access to my files
How can I let my fellow project team members read or write my files
How can I view images generated on the cluster
How do I find out the size of a directory
How do I fix my locale and language settings
How do I replace my Additional Authentication Credentials
How do I request memory
How do I run my Python Notebook through SLURM
I've run out of storage space
Login Troubleshooting
What are my bashrc and bash profile for
What does oom kill mean
What Is A Trusted Device
What is a core file
What is Multiple Factor Authentication MFA
What software environments are optimised for Machine Learning and data science
Where should I store my data on NeSI systems
Why am I seeing Account is not ready
Why does my program crash
Why is my job taking a long time to start
Policy
Policy
Acceptable Use Policy
Access Policy
Account Requests for non-Tuakiri Members
Acknowledgement, Citation and Publication
Allocation classes
Application Support Model
How we review applications
Institutional allocations
Licence Policy
Merit allocations
Postgraduate allocations
Privacy Policy
Proposal Development allocations
Release Notes
Release Notes
Scientific Computing
Scientific Computing
Supported Applications
Supported Applications
ABAQUS
AlphaFold
ANSYS
Apptainer
BLAST
BRAKER
CESM
Clair3
COMSOL
Cylc
Delft3D
Dorado
FDS
FlexiBLAS
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fastStructure
GATK
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GROMACS
ipyrad
Java
Julia
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MAKER
MATLAB
Miniforge3
Molpro
NWChem
OpenFOAM
OpenSees
ORCA
ont-guppy-gpu
ParaView
Python
R
RAxML
Relion
Supernova
Synda
snpEff
TensorFlow on CPUs
TensorFlow on GPUs
Trinity
VASP
VirSorter
VTune
WRF
Training
Training
Introduction to computing on the NeSI HPC
Introduction to computing on the NeSI HPC (YouTube Recordings)
Webinars
Workshops
Interactive computing with OnDemand
Interactive computing with OnDemand
How-to guide
Apps
Apps
JupyterLab
JupyterLab
Jupyter kernels - Tool-assisted management
Jupyter kernels - Manual management
RStudio
MATLAB
Code server
Virtual desktop
VS Code via OnDemand
Troubleshooting
Release Notes
Release Notes
Batch Jobs
Batch Jobs
Hardware
Job prioritisation
SLURM: Best Practice
Using GPUs
Job Checkpointing
Slurm Interactive Sessions
Fair Share
Checksums
Checking resource usage
Hyperthreading
Job Limits
Profiling and Debugging
Profiling and Debugging
Debugging
Profiler: ARM MAP
Profiler: VTune
Slurm Native Profiling
HPC Software Environment
HPC Software Environment
OpenMP settings
NVIDIA GPU Containers
Configuring Dask-MPI jobs
Software Version Management
Thread Placement and Thread Affinity
Installing (Third Party) applications
Compiling software: Mahuika
Run an executable under Apptainer in parallel
Run an executable under Apptainer on GPU
Software Installation Request
Temporary directories
Terminal Setup
Terminal Setup
Standard Terminal Setup
Git Bash (Windows)
MobaXterm Setup (Windows)
VSCode
Windows Subsystem for Linux (WSL)
WinSCP/PuTTY Setup (Windows)
X11
Research Developer Cloud
Research Developer Cloud
User Guides
Storage
Storage
File Systems and Quotas
File Systems and Quotas
Filesystems and Quotas
Automatic cleaning of scratch filesystem
Data Compression
File permissions and groups
Data Recovery
Data Recovery
File Recovery
Data Transfer Services
Data Transfer Services
Globus Quick Start Guide
Data Transfer using Globus
Globus endpoint activation
Globus Paths, Permissions, Storage_Allocation
Initial Globus Sign-Up, and your Globus Identities
Re-creating Shared Collections and Bookmarks in Globus
Personal Globus Endpoint Configuration
National Data Transfer Platform
Sync'ing with globus-automate
Data transfer without additional authentication credentials
Long Term Storage
Long Term Storage
Freezer long term storage
Configuring s3cmd
Freezer Guide
Other Useful Commands
Troubleshooting
Release Notes freezer.nesi.org.nz
Release Notes freezer.nesi.org.nz
2025/06/23
2025/07/17
2025/08/05
2025/08/26
2025/09/22
2025/10/15
2025/10/29
Cloud Storage
Cloud Storage
Research Developer Cloud Storage
Service Subscriptions
Service Subscriptions
Contracts and billing processes
Contracts and billing processes
Billing process
Types of contracts
Service Governance
Service Governance
Allocation approvals
Service Governance contact
Subscriber Monthly Usage Reports
Pricing
What is a Subscription?
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